I took our 3000 (they also have our BE for some mechanical that I gave up on) into a good local shop about 20 months ago with a rough target number of 15 grand (Canadian) for paint; we're over $45 now, and I'm not complaining - I'd hoped to get away with less than $ 30, but when they peeled the fenders off, we decided to buy new ones, and thank goodness that their metal man is an artist as there's been a lot of work and not a lot of filler to make them fit.
The shop is also great in that they're happy to have owners wander by - the owners particularly have to do a fair bit of hand holding as not all of their clients have spent hours trying to salvage fine thread fittings (for example) and have trouble understanding where all the time/hours/dollars have gone.
Body work is a real trust item, and this shop feels that they're better off having us turkeys owners wandering through thier premises reasonably often so that there are no surprises, and the owner both understands what is going on and can provide input.
I fully agree with the 'be positive' comment above. I've got a couple of engineering degrees and worked for decades in the pipeline industry - and recognition was a heck of a lot more important than salary for me over the years. Appreciate (and try to understand) the effort involved.
Currently I've lucked and have two seasonally unemployed (Alberta ain't quite like Alabama) motorcycle mechanics making progress on some of my other projects, and they've been to this shop to be introduced, and have made several trips on their own as they're assembling our second BE (bought in 1972, stored ever since, now just a painted/restored body tub), and being able to see one really helps.
Respect & communication gives you the best results, whether you're dealing with marriage and your life partner, or the body guys. And enough philosophy for the evening! And congrats on this major step! Doug